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  1. 1
    Open Access

    Multi-rate Poisson Tree Processes for single-locus species delimitation under Maximum Likelihood and Markov Chain Monte Carlo.

    by Kapli, P., Lutteropp, S., Zhang, J., Kobert, K., Pavlidis, P., Stamatakis, A., Flouri, T.
    Published in Bioinformatics (2017)
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  2. 2
    Open Access

    A QTL model to map the common genetic basis for correlative phenotypic plasticity

    by Zhou, T., Lyu, Y., Xu, F., Bo, W., Zhai, Y., Zhang, J., Pang, X., Zheng, B., Wu, R.
    Published in Briefings in Bioinformatics (2015)
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  3. 3
    Open Access

    From miRNA regulation to miRNA-TF co-regulation: computational approaches and challenges

    by Le, T. D., Liu, L., Zhang, J., Liu, B., Li, J.
    Published in Briefings in Bioinformatics (2015)
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  4. 4
    Open Access

    PEAR: a fast and accurate Illumina Paired-End reAd mergeR

    by Zhang, J., Kobert, K., Flouri, T., Stamatakis, A.
    Published in Bioinformatics (2014)
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  5. 5
    Open Access

    Identifying driver mutations from sequencing data of heterogeneous tumors in the era of personalized genome sequencing

    by Zhang, J., Liu, J., Sun, J., Chen, C., Foltz, G., Lin, B.
    Published in Briefings in Bioinformatics (2014)
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  6. 6
    Open Access

    A statistical model for QTL mapping in polysomic autotetraploids underlying double reduction

    by Xu, F., Lyu, Y., Tong, C., Wu, W., Zhu, X., Yin, D., Yan, Q., Zhang, J., Pang, X., Tobias, C. M., Wu, R.
    Published in Briefings in Bioinformatics (2014)
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  7. 7
    Open Access

    PhosphoNetworks: a database for human phosphorylation networks

    by Hu, J., Rho, H.-S., Newman, R. H., Zhang, J., Zhu, H., Qian, J.
    Published in Bioinformatics (2014)
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  8. 8
    Open Access

    IMID: integrated molecular interaction database

    by Balaji, S., Mcclendon, C., Chowdhary, R., Liu, J. S., Zhang, J.
    Published in Bioinformatics (2012)
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  9. 9
    Open Access

    PurityEst: estimating purity of human tumor samples using next-generation sequencing data

    by Su, X., Zhang, L., Zhang, J., Meric-Bernstam, F., Weinstein, J. N.
    Published in Bioinformatics (2012)
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  10. 10
    Open Access

    SVseq: an approach for detecting exact breakpoints of deletions with low-coverage sequence data

    by Zhang, J., Wu, Y.
    Published in Bioinformatics (2011)
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  11. 11
    Open Access

    A comprehensive protein-centric ID mapping service for molecular data integration

    by Huang, H., McGarvey, P. B., Suzek, B. E., Mazumder, R., Zhang, J., Chen, Y., Wu, C. H.
    Published in Bioinformatics (2011)
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  12. 12
    Open Access

    Bambino: a variant detector and alignment viewer for next-generation sequencing data in the SAM/BAM format

    by Edmonson, M. N., Zhang, J., Yan, C., Finney, R. P., Meerzaman, D. M., Buetow, K. H.
    Published in Bioinformatics (2011)
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  13. 13
    online resource

    Hierarchical spatial hashing-based collision detection and hybrid collision response in a haptic surgery simulator : Collision detection and response in a haptic surgery simulator:...

    by Li, X., Gu, L., Zhang, S., Zhang, J., Zheng, G., Huang, P., Xu, J.
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  14. 14
    Open Access

    dbNEI2.0: building multilayer network for drug-NEI-disease

    by Zhang, J., Ma, T., Li, Y., Li, S.
    Published in Bioinformatics (2008)
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  15. 15
    Open Access

    Computing exact P-values for DNA motifs

    by Zhang, J., Jiang, B., Li, M., Tromp, J., Zhang, X., Zhang, M. Q.
    Published in Bioinformatics (2007)
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  16. 16
    Open Access

    Extracting three-way gene interactions from microarray data

    by Zhang, J., Ji, Y., Zhang, L.
    Published in Bioinformatics (2007)
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  17. 17
    Open Access

    Gene sequence signatures revealed by mining the UniGene affiliation network

    by Zhang, J., Zhang, L., Coombes, K. R.
    Published in Bioinformatics (2006)
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  18. 18
    Open Access

    BioThesaurus: a web-based thesaurus of protein and gene names

    by Liu, H., Hu, Z.-Z., Zhang, J., Wu, C.
    Published in Bioinformatics (2006)
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  19. 19
    Open Access

    ATID: a web-oriented database for collection of publicly available alternative translational initiation events

    by Cai, J., Zhang, J., Huang, Y., Li, Y.
    Published in Bioinformatics (2005)
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  20. 20
    Open Access

    MicroRNA identification based on sequence and structure alignment

    by Wang, X., Zhang, J., Li, F., Gu, J., He, T., Zhang, X., Li, Y.
    Published in Bioinformatics (2005)
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